BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C01LP1|AL428862
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1760 0.0
>3x_Contig1609
Length = 15966
Score = 1760 bits (888), Expect = 0.0
Identities = 895/896 (99%), Gaps = 1/896 (0%)
Strand = Plus / Plus
Query: 1 gatcattatacatggatgcaagacgaatacgtaacgtattggttcgactatttgttatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12309 gatcattatacatggatgcaagacgaatacgtaacgtattggttcgactatttgttatgg 12368
Query: 61 tccgacatcttcgatagtacatcaggcaaagtatatttatcagaacgtgatcttgacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12369 tccgacatcttcgatagtacatcaggcaaagtatatttatcagaacgtgatcttgacaat 12428
Query: 121 ggctctatctctagtgctggtaataacactgcgggatctggtacagccacttcaagacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12429 ggctctatctctagtgctggtaataacactgcgggatctggtacagccacttcaagacag 12488
Query: 181 agcaatcgattggaaaggttcaattctaacgggtccattttgtctagaacgaacacgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12489 agcaatcgattggaaaggttcaattctaacgggtccattttgtctagaacgaacacgaac 12548
Query: 241 gatgatatcaagtcaaaaaattcactggattatagttcaaccaccaacggtg-caacgtt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12549 gatgatatcaagtcaaaaaattcactggattatagttcaaccaccaacggtggcaacgtt 12608
Query: 300 tcaggaaatggtagtagtgggaacaacaacggtggtagtggaggaaatggcagtggctgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12609 tcaggaaatggtagtagtgggaacaacaacggtggtagtggaggaaatggcagtggctgg 12668
Query: 360 ttcaagctgccatggtcttccaatgatgacgatagtactaataaagttaacaataataat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12669 ttcaagctgccatggtcttccaatgatgacgatagtactaataaagttaacaataataat 12728
Query: 420 gtacatgggaatgataatatggatcaatacaaaaatctattaaaacctaatatatggacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12729 gtacatgggaatgataatatggatcaatacaaaaatctattaaaacctaatatatggacc 12788
Query: 480 ggaaccaacgtcagactgttcccgttagtcattgatgaatgcgaatcggaattttcattt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12789 ggaaccaacgtcagactgttcccgttagtcattgatgaatgcgaatcggaattttcattt 12848
Query: 540 gttgatatgacctcatcgttactgaagagacttagatttaacagcaccgcaagtattaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12849 gttgatatgacctcatcgttactgaagagacttagatttaacagcaccgcaagtattaat 12908
Query: 600 tctatggatacaatgcaaaccctaagtaataactatacgtagatcgaataaaaaatacag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12909 tctatggatacaatgcaaaccctaagtaataactatacgtagatcgaataaaaaatacag 12968
Query: 660 ttcatgaaaagatattttcattattatctgccttgctcttcgcttatatcatccaaaagg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12969 ttcatgaaaagatattttcattattatctgccttgctcttcgcttatatcatccaaaagg 13028
Query: 720 gtgtgagtgtgctgtggaaacctcgattaatatcttcttttacccttcttttgaaccaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13029 gtgtgagtgtgctgtggaaacctcgattaatatcttcttttacccttcttttgaaccaat 13088
Query: 780 tcgaatccatcttcgtccaacactggttcaggtgccgaaatctgatgttctgaatttacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13089 tcgaatccatcttcgtccaacactggttcaggtgccgaaatctgatgttctgaatttacc 13148
Query: 840 aactgtgggacatcttcatccatattcacatcatcttcgtcagccccagcttcctc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13149 aactgtgggacatcttcatccatattcacatcatcttcgtcagccccagcttcctc 13204
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7113
Number of Sequences: 1807
Number of extensions: 7113
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)